Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928275.1_cds_XP_016475883.1_67772
CDS Infomation

[gene=LOC107797498] [db_xref=GeneID:107797498] [protein=pre-mRNA-splicing factor CWC22 homolog] [protein_id=XP_016475883.1] [location=11567..13141] [gbkey=CDS]
Sequence

ATGGAGAGATATTCATTGAGGAAAAGAGAAGATACATCAGTTGAATACGAGAGGATGAGT
TGGGATGCTCTTAGGAAGAGTATCAATGGATTGATGAATAAGGTGAACGCAGTCAACGTT
AAAAACGTTATCCCTGAATTGTTTTCTGAAAATTTAATTCGAGGTAGAGGCTTATTTTGC
AGGTACATTATCAAATCCCAAATCGCTTCTCCAATTTTCACTGACGTTTACGCTGCTGTA
GTTGCTGTTGTTAACAGCAAAATCCCAATAATCGGAGATCTTTTGCTAAGAAGAATTATA
CTGCAACTGAAAAAACCTTCCAATAAGCCACAGTTATTAGCATCTGTCAAGTTTATCGCT
CATCTTGTGAATCAGCAAGTCGTTCACGAACTTATTGCTTTGCAATTACTTACAGTTTTT
CTGGAGAAACCAACTGAAGAGAGTGTTGAGGTTGCGGTTAGTTTTGTTACTGAATGCGGT
TCAGTTCTTCAGGATTTCTGTCCCTTAGGGTTACACGCTATTTTTGAGCGGTTTAGAGAT
ATACTTCATGAAGGAAAAATAGATAAAAGGATTCAGTTCTTAATTGAAAACCTTTTTGCT
TTGAGAAAAGCCAAGTTTCAGGGATACCCTTCTGTTCGTCCTGAACTTGACCTTGTTGAG
CTAGAAGATCAATTAACACATGAAATTTCTCTCTCAGATAAAGTAGATGCGGAAATTGCT
TTGGATGTTTTCAAGCCGGATCCTAATTTTGCAGAAAACGAAAAAAAATATGAAGAATTA
AAGAAGATGATACTAGGTGAAGAATCTGTGGAAGAAGAAGATTCTGATGCAGAATCAGAC
GAAGAGGATGACGAGGAGAAAACGGAAATAAAAGATGAGACAGAAACAAACTTGATCAAT
CTTCGTAGGACGATTTACCAGACGATTATGTCAAGTGTTACTTTTGAAGAAGCAGGGCAT
AAGCTAATGAAATTAAGACTAGAGCCTGGTCAGGAGATGGAATTATGTGTAATGTTATTG
GAGTGTTGCGGTCAAGAGCGGACTTATCTCCGTTACTATGGGCATTTGGGTCAGCGTTTT
TGTATGATCAACAAAGTTTACCAGGAGAACTTTGATAAATGTTTTGTGCAGCAGTACTCC
ATGATTCACCGTCTTGAAACTAATAAACTGCGCAATGTGGCTAAGTTTTTCACTCATTTG
CTCGCTACTGATGCATTGCCTTGGCATGTTTTGGCTTATATAAGGTTGACGGAAGAGGAC
ACTACGTCTTCTTCTCGTATATTTATCAAGATCCTATTCCAGGAGTTGGCTGAGCAGCTT
GGCATCCGTTTGATGAATGAACGTCTTAATGATCCCACTATGCAACAGTCTTTTGAGTCA
ATATTTCCAAAGGATAATCCGAAAAATACTAGGTTTGCAATCAACTTCTTCACTTCCATT
GGTCTAGGTGGGATAACTGAAAATCTGCGAGAGTGTTTAAAGAACATGCCAAGGCTTATC
ATGCAAGAACAAAAGTCTGTCTCTAAATCAGGTGAATATGAGAGTTCAAGCTCTGTTTCA
GAATCTGAGTTCTGA

Peptide Sequence

PEP ID

XP_016475883.1
PEP Infomation

PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Nicotiana tabacum]
Sequence

MERYSLRKREDTSVEYERMSWDALRKSINGLMNKVNAVNVKNVIPELFSENLIRGRGLFC
RYIIKSQIASPIFTDVYAAVVAVVNSKIPIIGDLLLRRIILQLKKPSNKPQLLASVKFIA
HLVNQQVVHELIALQLLTVFLEKPTEESVEVAVSFVTECGSVLQDFCPLGLHAIFERFRD
ILHEGKIDKRIQFLIENLFALRKAKFQGYPSVRPELDLVELEDQLTHEISLSDKVDAEIA
LDVFKPDPNFAENEKKYEELKKMILGEESVEEEDSDAESDEEDDEEKTEIKDETETNLIN
LRRTIYQTIMSSVTFEEAGHKLMKLRLEPGQEMELCVMLLECCGQERTYLRYYGHLGQRF
CMINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFTHLLATDALPWHVLAYIRLTEED
TTSSSRIFIKILFQELAEQLGIRLMNERLNDPTMQQSFESIFPKDNPKNTRFAINFFTSI
GLGGITENLRECLKNMPRLIMQEQKSVSKSGEYESSSSVSESEF

Transcript Sequence

Gene sequence data has not been registered.